PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028089652.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 417aa MW: 46663.2 Da PI: 5.3699

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028089652.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.1	2.1e-10	191	234	1	34
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC.............T CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkas..........kap 34 +r++h ++Er+RR+++N+ + Lr+l+P+++ + + XP_028089652.1 191 QRMTHIAVERNRRRQMNDHLTSLRSLMPSSYiqreleqllqSLQ 234 79***************************765777777777333 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MESLQGPINP CLFGEEHVDV ETTNKTLGFS CFGQFVSADH HSLSFQEEEE EETQLRLRRS 60 GSLEDKMPFL EMLQSVESPS YSPLCELSLQ ALLNLQQQQQ SKNNPWDQSH SFQAPEQPES 120 CLTSYHDVLV KSETNNQQQQ VKPPVEEMEM EMEMAETRTG RDERGLKTVV KREKRKRMKP 180 AAKNKEEAES QRMTHIAVER NRRRQMNDHL TSLRSLMPSS YIQRELEQLL QSLQAQKRMK 240 KSELSSDQGR GGEEGGGGDT ASSSTSSSST TATENCTEVG ITTTARSKGR SNEFTAEKKS 300 AAADVRVTVI QKHVNLKVEC PRIPGQLLKA IVALEGLKLT VLHLNITSFE TSIHYSFNLK 360 ISISSTNSFC FLGGTTVNHF DLEERKAAIE DDCEVGSADG IAVAVHQIFS FVNNDDI

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MESLQGPINP CLFGEEHVDV ETTNKTLGFS CFGQFVSADH HSLSFQEEEE EETQLRLRRS  60
GSLEDKMPFL EMLQSVESPS YSPLCELSLQ ALLNLQQQQQ SKNNPWDQSH SFQAPEQPES  120
CLTSYHDVLV KSETNNQQQQ VKPPVEEMEM EMEMAETRTG RDERGLKTVV KREKRKRMKP  180
AAKNKEEAES QRMTHIAVER NRRRQMNDHL TSLRSLMPSS YIQRELEQLL QSLQAQKRMK  240
KSELSSDQGR GGEEGGGGDT ASSSTSSSST TATENCTEVG ITTTARSKGR SNEFTAEKKS  300
AAADVRVTVI QKHVNLKVEC PRIPGQLLKA IVALEGLKLT VLHLNITSFE TSIHYSFNLK  360
ISISSTNSFC FLGGTTVNHF DLEERKAAIE DDCEVGSADG IAVAVHQIFS FVNNDDI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	192	203	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61950.1	9e-35	bHLH family protein