PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028089657.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB_related

Protein Properties

Length: 766aa MW: 84014.1 Da PI: 6.4212

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028089657.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.6	4.3e-16	24	68	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE+ ++++a k++G W +I +++g ++t+ q++s+ qk+ XP_028089657.1 24 RERWTEEEHNRFLEALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 68 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 766 aa Download sequence
MDTYSSGEDL VIKTRKPYTI TKQRERWTEE EHNRFLEALK LYGRAWQRIE EHIGTKTAVQ 60 IRSHAQKFFT KLEKEALVKG VPIRQAIDIE IPPPRPKRKP SNPYPRKTGV AIPSLQVGAK 120 DGNNSSSVSS SCTATGKQIL DLEREPLPEK PDGDEKQENV KENQDEGNFS EVLTLFQEAP 180 CTSLSSVDKD SIRTLAAPRN SCTFREFVPM MVSTQDETNE SYVTVEPRGI QKLVKFDAKQ 240 TVQDNGTNYT SNLESSIPSH EKLVQGKKTD EMCHPENFGA LPSSDMQATH NYPRHVPVHV 300 LNGSLGMNTE NVSSDMSCQE SIFHQIGGIH GCPNPFSNPA ASATTEHHVN APRSSTHQQF 360 PPFHPLFTPI RNDQDDYQSY LHFASTFSNL IASTLLQNPA AHAAASFAAT FWPSTNMEAS 420 GLSPVDTLGG FPLRQMNPAP SMAAIAAATV AAAAAWWAAN GLLPVCTPFH TGFTCTPAST 480 TATPTNVGLA AAGNNDKREN ALHDLPLKNP QLDPEYSEAR QEQHSASKSP TLSSSDSEES 540 EGAKPNTGLT AADDHDEKAA AVVTDLHDSN KAKSRKRVDR SSCGSNTPSS SDVETDALQK 600 HEKDKEEPIE PDVSHPAGDS NNRRGRSSCI INDSWKEVSE EGRLAFRALF SRKVLPQSFS 660 PPQDNKQNAD EKAEDASRFD LNSMMWGTCP SHQVVQNNTF LRSENHGEGL LTIELGHGKL 720 KPHRTGFKPY KRCSVEAKQS KVVSAASSQG EEQCPKRIRL EGEAST

Sequence ? help Back to Top

Protein Sequence Length: 766 aa Download sequence

MDTYSSGEDL VIKTRKPYTI TKQRERWTEE EHNRFLEALK LYGRAWQRIE EHIGTKTAVQ  60
IRSHAQKFFT KLEKEALVKG VPIRQAIDIE IPPPRPKRKP SNPYPRKTGV AIPSLQVGAK  120
DGNNSSSVSS SCTATGKQIL DLEREPLPEK PDGDEKQENV KENQDEGNFS EVLTLFQEAP  180
CTSLSSVDKD SIRTLAAPRN SCTFREFVPM MVSTQDETNE SYVTVEPRGI QKLVKFDAKQ  240
TVQDNGTNYT SNLESSIPSH EKLVQGKKTD EMCHPENFGA LPSSDMQATH NYPRHVPVHV  300
LNGSLGMNTE NVSSDMSCQE SIFHQIGGIH GCPNPFSNPA ASATTEHHVN APRSSTHQQF  360
PPFHPLFTPI RNDQDDYQSY LHFASTFSNL IASTLLQNPA AHAAASFAAT FWPSTNMEAS  420
GLSPVDTLGG FPLRQMNPAP SMAAIAAATV AAAAAWWAAN GLLPVCTPFH TGFTCTPAST  480
TATPTNVGLA AAGNNDKREN ALHDLPLKNP QLDPEYSEAR QEQHSASKSP TLSSSDSEES  540
EGAKPNTGLT AADDHDEKAA AVVTDLHDSN KAKSRKRVDR SSCGSNTPSS SDVETDALQK  600
HEKDKEEPIE PDVSHPAGDS NNRRGRSSCI INDSWKEVSE EGRLAFRALF SRKVLPQSFS  660
PPQDNKQNAD EKAEDASRFD LNSMMWGTCP SHQVVQNNTF LRSENHGEGL LTIELGHGKL  720
KPHRTGFKPY KRCSVEAKQS KVVSAASSQG EEQCPKRIRL EGEAST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01060.3	1e-107	MYB_related family protein