PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028089743.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 849aa MW: 95443.1 Da PI: 6.326

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028089743.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	49.4	8.7e-16	309	350	5	46
RWP-RK 5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPh 46 ++ e+l+++F + +d+A++ gv+++++KriCR++GI+RWP+ XP_028089743.1 309 LTRENLEQHFGSSREDVANSFGVSVSTMKRICRKHGISRWPF 350 899**************************************7 PP
2	RWP-RK	57.4	2.8e-18	451	500	2	51
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 e+ +s+edl+++F ++ dAAk Lgv+++++Kri Rq+GI+RWP+ k ++ XP_028089743.1 451 ENVLSFEDLQQHFGCKLDDAAKALGVSVSTVKRISRQHGIPRWPSHKKRK 500 5679****************************************987665 PP

Sequence ? help Back to Top
Protein Sequence Length: 849 aa Download sequence
MGEEEEEQIL ERLRNQPIYS PPPSPTSVFL ISPQLYFSQP PPLSPQRHFS PPPTTSVLGF 60 SALPNFRSLV RIGLPPSRCQ IIYITVFELH EFSFSGRKDN RNLSVTILPS PLYLSQYLED 120 YAQDFGGAVD VILMFLDEIP RWWWRWRWRQ RLKLKSDLLS SLCVCEKEPD DIAEMTRTFV 180 LESIPSGLFL PPKSPKMVSI WSCLSVVKIS RKISIGLLQV LPSVQLPQTL HIVIVEEKMT 240 RLLSCSGEFI SQDSSLAEER SVEITVEVDA TNNGAHGVKA YENFPIVSHS EKKNMTDKLK 300 RNYKSISVLT RENLEQHFGS SREDVANSFG VSVSTMKRIC RKHGISRWPF QPERKKERLT 360 EVISPSMHEK HDSRLRCIQK PLHARSSPRT IALLDGGEMV QLDSSKQQSL VEFDVTTNSA 420 HLVKASQSCS TVSHLDETNS RETLKRKCTT ENVLSFEDLQ QHFGCKLDDA AKALGVSVST 480 VKRISRQHGI PRWPSHKKRK VSKTDCILLE PQGEKDVSST CSQMPTDGQT ERGNEMVGQL 540 QDQNEGPNLL NTENGSNKES ITTLIFEDSV PVFERDCILL EPQGEKNASP THKTPTNGQT 600 EVANGMVGHI RDQNGIVPEF IEGPNLSNIE NRSNEKSLTT PNFQDSAPGN YPAMDFSISS 660 TYRESGEAGG SSELAFQPKE LTQSTAYPNP DTCMFTQPHI SLREMLIENV GSSKDSRNFP 720 TSAMGFLTGG LVSESSWTMP LCSDQAPMQT MTTIPHTMPH LTEKQDIRTV TFKAQYRDKK 780 IKFRLSLSSG IVELKKEVTN RLGELGIFEV HYQDNDNEWI LIGCDTDVLD CFELSSSSGN 840 EVVRLLVRD

Sequence ? help Back to Top

Protein Sequence Length: 849 aa Download sequence

MGEEEEEQIL ERLRNQPIYS PPPSPTSVFL ISPQLYFSQP PPLSPQRHFS PPPTTSVLGF  60
SALPNFRSLV RIGLPPSRCQ IIYITVFELH EFSFSGRKDN RNLSVTILPS PLYLSQYLED  120
YAQDFGGAVD VILMFLDEIP RWWWRWRWRQ RLKLKSDLLS SLCVCEKEPD DIAEMTRTFV  180
LESIPSGLFL PPKSPKMVSI WSCLSVVKIS RKISIGLLQV LPSVQLPQTL HIVIVEEKMT  240
RLLSCSGEFI SQDSSLAEER SVEITVEVDA TNNGAHGVKA YENFPIVSHS EKKNMTDKLK  300
RNYKSISVLT RENLEQHFGS SREDVANSFG VSVSTMKRIC RKHGISRWPF QPERKKERLT  360
EVISPSMHEK HDSRLRCIQK PLHARSSPRT IALLDGGEMV QLDSSKQQSL VEFDVTTNSA  420
HLVKASQSCS TVSHLDETNS RETLKRKCTT ENVLSFEDLQ QHFGCKLDDA AKALGVSVST  480
VKRISRQHGI PRWPSHKKRK VSKTDCILLE PQGEKDVSST CSQMPTDGQT ERGNEMVGQL  540
QDQNEGPNLL NTENGSNKES ITTLIFEDSV PVFERDCILL EPQGEKNASP THKTPTNGQT  600
EVANGMVGHI RDQNGIVPEF IEGPNLSNIE NRSNEKSLTT PNFQDSAPGN YPAMDFSISS  660
TYRESGEAGG SSELAFQPKE LTQSTAYPNP DTCMFTQPHI SLREMLIENV GSSKDSRNFP  720
TSAMGFLTGG LVSESSWTMP LCSDQAPMQT MTTIPHTMPH LTEKQDIRTV TFKAQYRDKK  780
IKFRLSLSSG IVELKKEVTN RLGELGIFEV HYQDNDNEWI LIGCDTDVLD CFELSSSSGN  840
EVVRLLVRD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	491	500	PRWPSHKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	3e-37	Nin-like family protein