PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028089770.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ZF-HD
Protein Properties Length: 253aa    MW: 28543.1 Da    PI: 8.9082
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028089770.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer91.86.1e-2968123458
     ZF-HD_dimer   4 vrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRreve 58 
                       YkeClkNhA slG h+vD CgEfm+s ++  +++++lkCa CgCHRnFHRre++
  XP_028089770.1  68 SAYKECLKNHATSLGDHVVDDCGEFMSSLTSIsTEPTSLKCATCGCHRNFHRREPK 123
                     58**************************9888799******************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MEWDLLLLLL FNPPQIVSSS LIFLIQLRLH LMCLDELSYP FFRRPYNHRH RHRHLNGPPP  60
PPPPPTVSAY KECLKNHATS LGDHVVDDCG EFMSSLTSIS TEPTSLKCAT CGCHRNFHRR  120
EPKDPPPPSI AQHVIEYQSQ YRYHPPVLPR SLNSASPPPI SSAYYPSAPH MLLTLSAGLS  180
GQVPAKNRPV NSSGTGNPNG RKRHRTKFTQ DQKERMLEFA ERVGXKTXKR DDEVIAECCS  240
NVAVGRGIFK ELE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15210.19e-41ZF-HD family protein