PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028089775.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 259aa    MW: 28259.8 Da    PI: 4.9534
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028089775.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.11.9e-1773123155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVrw+   + Wv+e+r+p   +k+ r++lg+f tae+Aa+a++ a+ +l++
  XP_028089775.1  73 PVYRGVRWRN-AHTWVCEVREP---NKKSRIWLGTFPTAEMAARAHDVAAIALRN 123
                     68*******9.8******9998...347************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MDSSKKNVFS HYSDTLPSGS GFSSKEVAEC SSASDRGTGA HPAAICSDDE LLLASRNPKK  60
RGGRKKVKET RHPVYRGVRW RNAHTWVCEV REPNKKSRIW LGTFPTAEMA ARAHDVAAIA  120
LRNRMACVNF ADSVWRLPVP ASLDPKDIQK AAAEAAEMFR PPLLEEKKDV PGDVAKPEED  180
ATLTTTATTT ATETATETTM PENLLFMDDE AIFGMPGLLA NMAEGLMLPP PPPHSEGGDW  240
YEGDDAELGD DVSLWSFSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.13e-67ERF family protein