PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028089878.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 238aa MW: 25914.4 Da PI: 9.5467

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028089878.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.4	1.4e-32	46	100	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt++LH+rFv+a++qLGG+++AtPk +l++m+ +gLt++hvkSHLQkYRl XP_028089878.1 46 KQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGEPGLTIYHVKSHLQKYRL 100 79****************************************************8 PP
2	Myb_DNA-binding	59.3	8.2e-19	48	99	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++++++vda++qlGg+ t+k + r mg g+t +++ks++qky+ XP_028089878.1 48 RLRWTSDLHDRFVDAITQLGGPdraTPKGVLRVMGePGLTIYHVKSHLQKYR 99 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence
MYHAKKFSTA SLVPHKSPAP EQLALVGVLG GSAARSTAPA GGGGGKQRLR WTSDLHDRFV 60 DAITQLGGPD RATPKGVLRV MGEPGLTIYH VKSHLQKYRL AKYLPESPAD DQKKGSGDSL 120 NSLDSSQGVQ INDALRMQME VQKRLHEQLE VQRQLQMRIE AQGKYLQKII EEQQKLSGVL 180 KASETVPLPK DQPLAPSHSH PPPPPNASMS SFSPHKKQKL DDGSTEGGLP DFVPPEED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	5e-66	G2-like family protein