PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028089905.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 344aa MW: 38743.3 Da PI: 5.9175

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028089905.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	125.1	5.8e-39	35	131	33	128
NAM 33 vikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmhe 125 + evd+yk++Pw+Lp k + +++ ew+fF++rd+ky++g+r+nratk+gyWkatgkd++v++ +++++g +ktLvfy+grap g +tdWvmhe XP_028089905.1 35 RVVEVDLYKFDPWELPeKsFLPKRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVVC-QSSVTGYRKTLVFYRGRAPMGDRTDWVMHE 128 4889*********95344555788**********************************.9999************************ PP NAM 126 yrl 128 yrl XP_028089905.1 129 YRL 131 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MVLVLVLVLV FGAGVGVGIG LHQELEHFIM AMLCRVVEVD LYKFDPWELP EKSFLPKRDM 60 EWFFFCPRDR KYPNGSRTNR ATKAGYWKAT GKDRKVVCQS SVTGYRKTLV FYRGRAPMGD 120 RTDWVMHEYR LCDDLSQGSP TFQGGFALCR VVKKNELAQK TNDGYGEPKA KRIGSSSSIG 180 DFTSTGMSSE AVTVSEDTTF QMSHLGNSSN FSSPVTSPYQ TTPMVESEAF SMGTNPSSLW 240 VSPDLILDSS KEYPQRQGVS AYYPQCEFPN STTQWQTYNQ YEISPSSSYS NFTEEVELGD 300 GLSQFCSMSP YSGHTNYMGF CGNDDVQYEG YDHQTNSLRN PKHF

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MVLVLVLVLV FGAGVGVGIG LHQELEHFIM AMLCRVVEVD LYKFDPWELP EKSFLPKRDM  60
EWFFFCPRDR KYPNGSRTNR ATKAGYWKAT GKDRKVVCQS SVTGYRKTLV FYRGRAPMGD  120
RTDWVMHEYR LCDDLSQGSP TFQGGFALCR VVKKNELAQK TNDGYGEPKA KRIGSSSSIG  180
DFTSTGMSSE AVTVSEDTTF QMSHLGNSSN FSSPVTSPYQ TTPMVESEAF SMGTNPSSLW  240
VSPDLILDSS KEYPQRQGVS AYYPQCEFPN STTQWQTYNQ YEISPSSSYS NFTEEVELGD  300
GLSQFCSMSP YSGHTNYMGF CGNDDVQYEG YDHQTNSLRN PKHF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17980.1	1e-77	NAC family protein