PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028089933.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 266aa MW: 31266.5 Da PI: 5.2797

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028089933.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.1	1.2e-22	71	159	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 fYn+YAk Fs+r+++ +k k+n +++r++vCskeg+r+++ + +e++r++++ tr+gC+a++++k ++ ++k+ev+++ +eHnH++ XP_028089933.1 71 FYNSYAKVKAFSIRRDQLYKDKNNM-VISRNWVCSKEGHRQSKYLEvEERKREPKQLTRVGCRARFRIKYNRsTSKYEVNEFFKEHNHSM 159 9*****************96666.9***********998867888899************999*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MEDNTEQNKN NIIYELDDDD GNGGEYNIHN EDDIINSNDI PTERDIKRLD ELTENDVFEM 60 TFDSEENGEG FYNSYAKVKA FSIRRDQLYK DKNNMVISRN WVCSKEGHRQ SKYLEVEERK 120 REPKQLTRVG CRARFRIKYN RSTSKYEVNE FFKEHNHSMI GPLGVQFLRS HRNVMSADKA 180 QGNAMHHIGM RTSHIMDFAA QQASGYENVG FIQKDMYNHF GIERRAQVVD GDAKGALAYL 240 CSKEEQDPMF YYKYDVDEEN RLNNLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-29	FAR1 family protein