PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028090033.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 350aa    MW: 40901.6 Da    PI: 5.9377
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028090033.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR149.71.2e-151821091
            FAR1 10 vGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91
                    +GFs+rk++ +k+k+++eit++tfvC+ke ++  +k++    +++r+e r+g  a++ +k+++ +gk+   +++++HnH+l+p
  XP_028090033.1  1 MGFSIRKAYANKNKHTKEITSQTFVCYKEESQGIDKRD-PLVKNPRQEVRCGYGARFSIKLDRiSGKYIACDFVEHHNHDLVP 82
                    7*********************************9999.89999************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MGFSIRKAYA NKNKHTKEIT SQTFVCYKEE SQGIDKRDPL VKNPRQEVRC GYGARFSIKL  60
DRISGKYIAC DFVEHHNHDL VPQDRIYMLP SQRQISTTQA IEVELTLESG IRLRSAYELF  120
VQLDCEEQIS NIFWADTQMI MDYAQFGDVV TFDTTYKLNN EHKHFGSFVE FNHHRETVIF  180
SAALMYDETV ESFTWLFQIF LEAMSNKAPK TIFTYQDAAI AKAIPIVIPD TNHRLFGMST  240
TQLSKSFNAF LMDYLNCDHN LMEFFMHFER VLYEKRYKEL EAEYNLSQKL PKVSIPTLML  300
EQVAEIYTKT IFEEFQNEYV QSIETSIIGT IHDGESTIFT IRTVVDGKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.17e-36FAR1 family protein