PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028090085.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 309aa    MW: 34874.1 Da    PI: 9.8348
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028090085.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding231.9e-072872345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     rWT+ E + + +a + + ++   +W+++a++++ g+t  ++   + 
   XP_028090085.1 28 RWTPAENKMFENALAIFDKDtpeRWDRVAAMIP-GKTVGDVMKQYK 72
                     9********************************.***999987775 PP
2Myb_DNA-binding44.24.6e-14137181347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + k++G+g+W+ I+r    +Rt+ q+ s+ qky
   XP_028090085.1 137 PWTEEEHKLFLLGLKKYGKGDWRNISRNYVMTRTPTQVASHAQKY 181
                      7*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MRWGMEILSP ASYFPSSNWL IEESRSTRWT PAENKMFENA LAIFDKDTPE RWDRVAAMIP  60
GKTVGDVMKQ YKELEDDVSI IEAGSFPGPH WYSSTSPFTL EWGNNHGFGG FKQGYGPGGK  120
RSLSTRPSEH ERKKGIPWTE EEHKLFLLGL KKYGKGDWRN ISRNYVMTRT PTQVASHAQK  180
YFIRQLSGGK DKRRASIHDI TTVNLNDNQT PPPENKRPPP SPDHSSAVSQ QPNAASMNRT  240
QFQWNQPNGG GSTMAFDTTL GNMFMPPHGI NSYGLKLQPQ NLLKSSMHES YVGSQNMVFP  300
MQSAHHFPG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.12e-88MYB family protein