PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028090116.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 225aa    MW: 26291.8 Da    PI: 10.432
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028090116.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.23.9e-0889132346
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqk 46 
                      + + eE+e l  av+++G + W  I +t+  +gR++++ k +w  
   XP_028090116.1  89 PYSLEEQENLTLAVAKHGRN-WQEIKETLKgTGRSDENWKQKWKE 132
                      7899**************66.*****************9999975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MHLFNSFYSV PGVVLRKTKE TRTTGIDLKG KRTRVNDEPD GSTSQSSLRR SNYGRTAPLE  60
SQFTFPATAH DITNHHVASS SRPCNPKRPY SLEEQENLTL AVAKHGRNWQ EIKETLKGTG  120
RSDENWKQKW KEMMRKAMTP DARNKMDEYQ KCLHILAAVV QFNVEKHSKA NEEFRKWFKA  180
MGKEDREKME RAEKWLDDLK QKRSFLQIQT TQGYVGATYF KNFKK