PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028090170.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 288aa MW: 33392.8 Da PI: 7.1892

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028090170.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	84.1	2.3e-26	25	114	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r+++ kk k +++ ++r +vC++eg+r+ +k++ ++++raetrtgC+a+l +k+++ +gk++vt+++++HnH+l+ XP_028090170.1 25 EFYNTYGGRMGFSIRRDYCKKDKFSNQLIHRLLVCNNEGFRKVDKRD-PLSKNSRAETRTGCEARLYIKLHEgTGKYVVTDFKEKHNHDLV 114 6*****************************************999.9999****************9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MEPENDCDWK PKLGMVFDSE QCAYEFYNTY GGRMGFSIRR DYCKKDKFSN QLIHRLLVCN 60 NEGFRKVDKR DPLSKNSRAE TRTGCEARLY IKLHEGTGKY VVTDFKEKHN HDLVSPECAH 120 MLPSQRKIST TQAIQLDLAA QSGLRLGQSF ELMGREAGGR QCLGFTKLDS KNYLRTKRQQ 180 SLAYGEVGNV LQYFKEKSLQ NPSFFYAVQL DNEEQITNMF WADAQMIMDY AQFGDVVTFD 240 ATYKLNKEHR PFASFVGFNH HRETVIFGAA LLYDETAESF VWLFENFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-70	FAR1 family protein