PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028090331.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ZF-HD
Protein Properties Length: 300aa    MW: 33380.7 Da    PI: 8.4269
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028090331.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer99.32.8e-3178134259
     ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                     + +rY+eClkNhAas+Gg+a+DGCgEfmps g egt +al+C+ C+CHRnFHR+e e 
  XP_028090331.1  78 KMIRYRECLKNHAASMGGNATDGCGEFMPS-GLEGTLEALTCSVCNCHRNFHRKEIEG 134
                     5789*************************9.999********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MDLSSQEGEI PIPINSSYGH GHMIHHDATP HNHIIPQPQP QPQIQIQIPS SNNGSIPTST  60
TTTPPPLLED HHHVPYKKMI RYRECLKNHA ASMGGNATDG CGEFMPSGLE GTLEALTCSV  120
CNCHRNFHRK EIEGEPSSCD CFPATTTNRV GIGRKFILGH HHHHKNIFGP DALAYPTSAL  180
IPTPRPTQAH QMIMSYNLGS LPSESDEQGE GGGGGVVVAR PSSHQLVKKR FRTKFSQEQR  240
EKMLNFAEKV GWKIQKQEES VVQQFCQEIG VKRRVLKVWM HNNKHNLAKK SPNSTDQNPV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02540.14e-69ZF-HD family protein