PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028090677.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 317aa    MW: 36438.1 Da    PI: 7.4271
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028090677.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR137.57.9e-124195155
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtr 55
                    +fYneY++ vGF++rk++ +ks+++g +t r+fvC ke ++e++k+ t  +++++
  XP_028090677.1 41 EFYNEYGRIVGFNIRKDYCNKSNKDGVMTIRKFVCCKERESEKDKRYTMIKNHRK 95
                    6*****************************************9999854444444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MEDGIMDDGG LEGCIEEMRE LAKDKSPYLG MEFPSEEAAY EFYNEYGRIV GFNIRKDYCN  60
KSNKDGVMTI RKFVCCKERE SEKDKRYTMI KNHRKILERY VLGRWRLDEK DCEVEEKNVI  120
MDKDDSKLLI LARYRYLCPR IVKLAIQASM HKPAYQLVDE GIKEFCVKVN NMMKGVENFG  180
TKELDVDDPN FAQVKGIKKK DIGHKIIGQS RNTTNVKNSS SSQPQTISQS SNITNVQSLS  240
QPHPQLINYG YNLLTRDTNS YSLRYPQSQS LSFQASHSPQ SSQGISLNLA GHNPMETEFR  300
NESSFDFSIY SQPPPQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.13e-12FAR1 family protein