PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028090777.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 300aa    MW: 33276.6 Da    PI: 7.1198
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028090777.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.21.7e-14115161354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h+e+ErrRR+riN+ +++Lr+llP+      +K +Ka+ L ++++++k+L
  XP_028090777.1 115 KSHSEAERRRRERINNHLAKLRSLLPST-----TKTDKASLLAEVIQHVKEL 161
                     79*************************9.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MKFKPHVGVS PILPWSLPPV HSFNQVHFAS NPTRDDDPFL LPPPQSTYGG FLNRRGPSLQ  60
FAYDGSPSDH LRIISDTLGQ VVHHHGSAAP FGLQAELGKM TAQEIMDAKA LAASKSHSEA  120
ERRRRERINN HLAKLRSLLP STTKTDKASL LAEVIQHVKE LKRQTSLIAE TSPVPTEVDE  180
LSVDASDDED GKFLIRASLC CEDRSDLLPD LIKTLKALRL RTLKAEITTL GGRVRNVLFI  240
TGEEDSDSGD QQQQQQQQYC LSSIQEALKA VMEKTNGDDS SSGSIKRQRT NMNILEHRSL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1121126ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.11e-85bHLH family protein