PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028091032.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YB
Protein Properties Length: 126aa    MW: 14297.2 Da    PI: 4.0729
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028091032.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB80.52.2e-251641796
           NF-YB 17 mkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96
                    mkk+lPanakiskdaket+qec+sefisf+t                g+dllwa++tlGfe+yv+plkvyl ++r++eg+
  XP_028091032.1  1 MKKALPANAKISKDAKETIQECISEFISFIT----------------GNDLLWAMTTLGFEEYVKPLKVYLLRFRDMEGK 64
                    9****************************87................68****************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    
MKKALPANAK ISKDAKETIQ ECISEFISFI TGNDLLWAMT TLGFEEYVKP LKVYLLRFRD  60
MEGKICCVLF GTGTGILVIN DEFASLETDM LDTHDDFISS NESEIKEWDF PEEELESNDL  120
GSRNLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.11e-32NF-YB family protein