PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028091076.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 318aa    MW: 36318 Da    PI: 8.774
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028091076.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.85.3e-18107152147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg W + Ed +l+++v+q+G+ +W++Ia++++ gR++k+c++rw++ 
   XP_028091076.1 107 RGHWRPHEDSKLKELVTQYGPQNWNLIAEKLQ-GRSGKSCRLRWFNQ 152
                      899*****************************.***********996 PP
2Myb_DNA-binding56.37.6e-18160202246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       ++++eE+e+l+ a++++G++ W+ Iar ++ gRt++ +k++w+ 
   XP_028091076.1 160 RAFSEEEEERLLAAHRMYGNK-WAMIARLFP-GRTDNAVKNHWHV 202
                      689******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MNLQHMNSNG AHDINGFRDI NFLIPPPPGQ LSLSMKHLGE RNGYHQILNP PFQNKPWCFA  60
PMEEGSETDD GTDMGSGGID RNGLDLDQGD DEDSIEKKFG RTKLCARGHW RPHEDSKLKE  120
LVTQYGPQNW NLIAEKLQGR SGKSCRLRWF NQLDPRINKR AFSEEEEERL LAAHRMYGNK  180
WAMIARLFPG RTDNAVKNHW HVIMARRHRE QNTVYRRRKP SSCSPKGFDG MIMINGYNNH  240
LNNACSESTI SSANIDESGS TCTDLSLTPS STIVRPGFGF VSRLVSPVLQ HHQPYGLQMG  300
MITFYYLKFY VHKILSQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17800.17e-67MYB family protein