PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028091160.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YB
Protein Properties Length: 218aa    MW: 24111.1 Da    PI: 6.3957
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028091160.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB171.96.8e-5454150197
           NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                     vreqdrf+Pianv+rim+k+lP +akis+daket+qecvsefisf+t+ea+d+cqre+rkti+++d+lwa+++lGf+dy+epl++yl+++r++eg
  XP_028091160.1  54 VREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEFISFITGEANDRCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLNRFRDFEG 148
                     69********************************************************************************************* PP

           NF-YB  96 ek 97 
                     ++
  XP_028091160.1 149 DR 150
                     97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MERGETGGFH GYSRTPQTSS GMKLSEISMR SSEINTTNKN IHHSTTTNDS ECTVREQDRF  60
MPIANVIRIM RKILPPHAKI SDDAKETIQE CVSEFISFIT GEANDRCQRE QRKTITAEDV  120
LWAMSKLGFD DYIEPLTLYL NRFRDFEGDR NSLVKRTVDF GAGVSTVAGF APVFQLGHGF  180
FGVAPMGVGM GGFMKEGSNA GSSQAGVAEH DPYAHCNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47670.13e-73NF-YB family protein