PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028091191.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 431aa MW: 49142.6 Da PI: 6.7874

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028091191.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.2	7.5e-20	92	185	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 fYn+YAk GFs++ks+ +++ ++g++++r + Cs+eg+r ++ + +ek++ ++a tr+gCka+++++ + gk+++t+++ +HnH l+ XP_028091191.1 92 FYNAYAKAKGFSIQKSRFNTN-KEGKVVSRLWLCSREGQRLPKYLDrvAEKSKAPKAITRVGCKAQFRIRYDAdageGGKYVMTHFVADHNHVLV 185 9**************9999.666699999*****99988877888999************987677789***********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MAPAEVKREG DDYDIPNEAD DIRLMNESRA EPYHGCEVGL SNEEATNMNI EDGGADVKKE 60 MVDDVHRNDM VGDVEHAILE QKFDSVEDGE AFYNAYAKAK GFSIQKSRFN TNKEGKVVSR 120 LWLCSREGQR LPKYLDRVAE KSKAPKAITR VGCKAQFRIR YDADAGEGGK YVMTHFVADH 180 NHVLVEQHCV MYLRSHRSLN SADKAQAMAM RNVGVKTSQI MDYMVNQSRS YENVGFICTD 240 LHNHIQAERR AEVEDDSKSR ADYAKFGDVL IFDSTYRTNA YKKPFVMLAD ETSHFRTTIF 300 ACVVLANETI DTYTWVLETF MEAMGNKAPV SVLTDGDKAM REAIRRVFTD ARHRLCNWHL 360 GKNVVSNVHK SGFAHAFKQC MDMETDKTKF EHGWTTMVEN LDFKPTVGCW RHMRRVICGL 420 RHICVDISLL G

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MAPAEVKREG DDYDIPNEAD DIRLMNESRA EPYHGCEVGL SNEEATNMNI EDGGADVKKE  60
MVDDVHRNDM VGDVEHAILE QKFDSVEDGE AFYNAYAKAK GFSIQKSRFN TNKEGKVVSR  120
LWLCSREGQR LPKYLDRVAE KSKAPKAITR VGCKAQFRIR YDADAGEGGK YVMTHFVADH  180
NHVLVEQHCV MYLRSHRSLN SADKAQAMAM RNVGVKTSQI MDYMVNQSRS YENVGFICTD  240
LHNHIQAERR AEVEDDSKSR ADYAKFGDVL IFDSTYRTNA YKKPFVMLAD ETSHFRTTIF  300
ACVVLANETI DTYTWVLETF MEAMGNKAPV SVLTDGDKAM REAIRRVFTD ARHRLCNWHL  360
GKNVVSNVHK SGFAHAFKQC MDMETDKTKF EHGWTTMVEN LDFKPTVGCW RHMRRVICGL  420
RHICVDISLL G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	8e-52	FAR1 family protein