PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028091328.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 327aa    MW: 36707.1 Da    PI: 5.6764
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028091328.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.42.5e-162067148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEde+l ++  + G g+W+ Iar  g+ R++k+c++rw +yl
   XP_028091328.1 20 KGLWSPEEDEKLMKYMMRNGQGCWSDIARNAGLQRCGKSCRLRWINYL 67
                     678*******************************************97 PP
2Myb_DNA-binding50.25.7e-1673116146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+++++E++l+++++  lG++ W+ Ia++++ gRt++++k++w++
   XP_028091328.1  73 RGAFSPQEEDLIIHLHSILGNR-WSQIAARLP-GRTDNEIKNFWNS 116
                      89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MRKPEAMGKP EKVSKSKVRK GLWSPEEDEK LMKYMMRNGQ GCWSDIARNA GLQRCGKSCR  60
LRWINYLRPD LKRGAFSPQE EDLIIHLHSI LGNRWSQIAA RLPGRTDNEI KNFWNSTIKK  120
RLKNNNFTST STSSPNNSNS SEEPSRHVIG GTTMSMQEQG NIMNMCMDTF SSSWSMHGMP  180
TPNSFNPFPL PLDNAYDARV TAGLFSIPTW LGHVGMGDGC CEDYGIGEER LSVMAELEGD  240
LSIPSLESRG IVENNGGGAD YNLDKKISNN NHLNNNNNNS DEAIIKAEDV FGFGNHWQGE  300
NLKMGEWDLD GLLENVSSFP YLDFQVE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G08500.12e-81MYB family protein