PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028091362.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB_related

Protein Properties

Length: 552aa MW: 62312.5 Da PI: 4.1022

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028091362.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.5	1.3e-07	314	362	2	47
SSS-HHHHHHHHHHH....HHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdav....kqlGggtWktIartmgkgRtlkqcksrwqky 47 grW+ eE+ l+ ++v + lG++ W+ + ++ +Rt k+++s+++++ XP_028091362.1 314 GRWSLEEEHLFQEVVfsnpASLGKNFWDHLSMVFP-NRTKKDIVSYYFNV 362 8************4444455666******.*********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 552 aa Download sequence
MYFAELISMV QKRPFVDEET YEVSCKYQRQ LEYSNQLVSF LEFVLLRIQH SNQTFQENSI 60 RMECYMLPFL RLEIINGNLG ALNEGLYSSV WLTGQCVIGE GGGCFIKGDE KHTELLICTE 120 NDGKTSSPDS VSNTSLDSCS VSKEDNGSEV PFHLLFSHDR CNPDWPRRTL VHSEEIYTSL 180 LECPPRKLVP VGSDFQADIP EWGTQGTKNV TGGSNGSEPL THFPQASELD LSDHNDDETK 240 LAGICVIPMP EFGPSAYNGD TVGDGRTDCC CRDSGSDRCV RQHIKEAREK LWRILGPESF 300 LELGFCDMGE VVAGRWSLEE EHLFQEVVFS NPASLGKNFW DHLSMVFPNR TKKDIVSYYF 360 NVFVLRRRAE QNICYPMNID SDDDEWQGSE DSVEEDEDSV VESPVCQDDP FHNEIHEEDS 420 NEYDDNVANA GFNNCENIVV DCDDSIINVP ETQRGKLFWD DSRDHYLQDD SCTSSDAGTE 480 PQSTHVKANH GNYCLDGFNS HEFDLEPCDT KVWDIGYLTC PKNEVDFLPT CSMIEEVFGA 540 GAWNYNASDG QG

Sequence ? help Back to Top

Protein Sequence Length: 552 aa Download sequence

MYFAELISMV QKRPFVDEET YEVSCKYQRQ LEYSNQLVSF LEFVLLRIQH SNQTFQENSI  60
RMECYMLPFL RLEIINGNLG ALNEGLYSSV WLTGQCVIGE GGGCFIKGDE KHTELLICTE  120
NDGKTSSPDS VSNTSLDSCS VSKEDNGSEV PFHLLFSHDR CNPDWPRRTL VHSEEIYTSL  180
LECPPRKLVP VGSDFQADIP EWGTQGTKNV TGGSNGSEPL THFPQASELD LSDHNDDETK  240
LAGICVIPMP EFGPSAYNGD TVGDGRTDCC CRDSGSDRCV RQHIKEAREK LWRILGPESF  300
LELGFCDMGE VVAGRWSLEE EHLFQEVVFS NPASLGKNFW DHLSMVFPNR TKKDIVSYYF  360
NVFVLRRRAE QNICYPMNID SDDDEWQGSE DSVEEDEDSV VESPVCQDDP FHNEIHEEDS  420
NEYDDNVANA GFNNCENIVV DCDDSIINVP ETQRGKLFWD DSRDHYLQDD SCTSSDAGTE  480
PQSTHVKANH GNYCLDGFNS HEFDLEPCDT KVWDIGYLTC PKNEVDFLPT CSMIEEVFGA  540
GAWNYNASDG QG