PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028091452.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 541aa MW: 63523.9 Da PI: 7.9238

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028091452.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74.7	1.9e-23	70	159	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYn+YAk GFs+r+++ +k k+n +++r +vCskeg+r+++ + +e++r++++ tr+gC+a++++k ++ ++k+ev+++ +eHnH++ XP_028091452.1 70 RFYNSYAKVKGFSIRRDQLYKDKNNM-VISRSWVCSKEGYRQSKYLEvEERKREPKQLTRVGCRACFRIKYNRsTSKYEVNEFFKEHNHSM 159 5******************96666.9***********998867888899************999*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 541 aa Download sequence
MEDNTEQNKN NIIYELVDDD GNDGEYNIHN EDDIVNSNNI PTERDIKRLD ELTEKDVFEM 60 TFDSEENGER FYNSYAKVKG FSIRRDQLYK DKNNMVISRS WVCSKEGYRQ SKYLEVEERK 120 REPKQLTRVG CRACFRIKYN RSTSKYEVNE FFKEHNHSMI GPLGVQFLRS HRNVTSADKA 180 QGNAMHHIGM RTSHIMDFAA QQAGGYENVG FIQKDMYNHF GTERRVQVVD GDAEGALAYL 240 CGKEEQDPMF YYKYDVDEEN RLNNLFWTDG GSRTDYLYFG DVLMFDTTYR TNAYNKPFVI 300 LQGVSNHFQT TVFGCALLAS ETVETYIWVL EKFLDAMDHK MPLSVITDGD KAMCRAIKTV 360 MPTARHRLCK WHLKMNALSN IHIEGFLHSF EKCMSMQCTQ EMFELEWKNF VDKYGRHNNK 420 WIAYVYCKRT LWAEAYLHGH FFAGAKSTQR CKSMNAFLNR FLKVRLRLFE FVRAYDRALA 480 RLRHNEAKAQ SETENTTPIL STGMKRIERH AADIFTRAIF FKFREQIKSE QVLFMSGKTS 540 K

Sequence ? help Back to Top

Protein Sequence Length: 541 aa Download sequence

MEDNTEQNKN NIIYELVDDD GNDGEYNIHN EDDIVNSNNI PTERDIKRLD ELTEKDVFEM  60
TFDSEENGER FYNSYAKVKG FSIRRDQLYK DKNNMVISRS WVCSKEGYRQ SKYLEVEERK  120
REPKQLTRVG CRACFRIKYN RSTSKYEVNE FFKEHNHSMI GPLGVQFLRS HRNVTSADKA  180
QGNAMHHIGM RTSHIMDFAA QQAGGYENVG FIQKDMYNHF GTERRVQVVD GDAEGALAYL  240
CGKEEQDPMF YYKYDVDEEN RLNNLFWTDG GSRTDYLYFG DVLMFDTTYR TNAYNKPFVI  300
LQGVSNHFQT TVFGCALLAS ETVETYIWVL EKFLDAMDHK MPLSVITDGD KAMCRAIKTV  360
MPTARHRLCK WHLKMNALSN IHIEGFLHSF EKCMSMQCTQ EMFELEWKNF VDKYGRHNNK  420
WIAYVYCKRT LWAEAYLHGH FFAGAKSTQR CKSMNAFLNR FLKVRLRLFE FVRAYDRALA  480
RLRHNEAKAQ SETENTTPIL STGMKRIERH AADIFTRAIF FKFREQIKSE QVLFMSGKTS  540
K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-100	FAR1 family protein