PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028091549.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 408aa MW: 47823.4 Da PI: 7.1026

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028091549.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.9	6.9e-23	36	124	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYneY++ +GF +r+++++ks+++g +++r+f C k g++e++k+ ++++ etrt+C+a + v++++ +kw v+k++ + nH+l XP_028091549.1 36 QFYNEYGRIMGFGIRRDYHSKSRKEGAMINRKFICCKDGEKEKDKQY-MIVNHPKHETRTKCNAFMYVSLDRgLSKWIVKKFDDNYNHPL 124 6****************************************9999.99999***************99************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MENDGHEGCS KNMGELTKDK TPCLGMEFHS EEVTNQFYNE YGRIMGFGIR RDYHSKSRKE 60 GAMINRKFIC CKDGEKEKDK QYMIVNHPKH ETRTKCNAFM YVSLDRGLSK WIVKKFDDNY 120 NHPLHLPQCT HLIPSQRKLN QVQALNVDIG DETGISLKAS HDLISALEGG KENLGFMRED 180 QKSYLRGKRQ RNLQYGEAGS LLRFFQRQAA ENPYFYYAIQ LDMDEMITNI FWADHEMITD 240 YELFGDAVSF DTTFRTNKEY WALALFTGFN HFRKTVIFGA SLLYDETTAS FEWLFETFLH 300 AMSGEKPRCF FADQDQAIKA ISVVMPKVFY GLCTFHLMQN ALKHLGHLYK SGSKFGSDFK 360 ACIFGCEDEH ELIKAWDSLI DKYNLYENAW MKKTWEKREQ WAHVYMKY

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MENDGHEGCS KNMGELTKDK TPCLGMEFHS EEVTNQFYNE YGRIMGFGIR RDYHSKSRKE  60
GAMINRKFIC CKDGEKEKDK QYMIVNHPKH ETRTKCNAFM YVSLDRGLSK WIVKKFDDNY  120
NHPLHLPQCT HLIPSQRKLN QVQALNVDIG DETGISLKAS HDLISALEGG KENLGFMRED  180
QKSYLRGKRQ RNLQYGEAGS LLRFFQRQAA ENPYFYYAIQ LDMDEMITNI FWADHEMITD  240
YELFGDAVSF DTTFRTNKEY WALALFTGFN HFRKTVIFGA SLLYDETTAS FEWLFETFLH  300
AMSGEKPRCF FADQDQAIKA ISVVMPKVFY GLCTFHLMQN ALKHLGHLYK SGSKFGSDFK  360
ACIFGCEDEH ELIKAWDSLI DKYNLYENAW MKKTWEKREQ WAHVYMKY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-79	FAR1 family protein