PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028091628.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 278aa MW: 30805.9 Da PI: 8.4016

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028091628.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.2	7.2e-14	92	138	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h+++E+rRRdriN +++Lr+l+Pk+ K++Ka+ L +ve++k+L XP_028091628.1 92 HSHSQAEKRRRDRINAQLATLRKLIPKS-----DKMDKAALLGSVVEHVKDL 138 68***********************8.....7**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence
MEKSDLYSEW ADEEYQAAVK KNKNYSSFVV PWPSCGDGEA SISSQCVGLG YDHHHHHHHH 60 HLDHDPSCSW SNMPFGVVEA KEDGAASGSK SHSHSQAEKR RRDRINAQLA TLRKLIPKSD 120 KMDKAALLGS VVEHVKDLKR KAMEVSKVLT VPTDVDEVTI DCYFDQETTI SSNMSKENIL 180 IKASVCCDDR PELLAELNQA LRGLKLTTVR ADMASLGGRI KSIFVLCSKD GKEGVCMKGV 240 IQSLKGVLSR IASSTSTGGS SYRIKSKRQR FFLPSSHY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	265	270	KSKRQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40200.1	9e-48	bHLH family protein