PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028091746.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 234aa    MW: 26904 Da    PI: 10.5531
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028091746.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.21.2e-17134224199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+k +t+s+v+   +l lp +f++++   ++++ t+tl de+g+++   +  rk +    l++GW++F  ++gL +gD +vF+l++ + f  +v 
  XP_028091746.1 134 FLKPMTQSHVTGGFWLGLPVHFCRRNL--PRRDETVTLVDEEGEEYPTVYLARKAG----LSGGWRGFSIDHGLVDGDAIVFQLIRPTVF--KVY 220
                     89**********************995..456779***************555555....*************************97888..888 PP

                     EE-S CS
              B3  96 vfrk 99 
                     ++r+
  XP_028091746.1 221 IIRA 224
                     8876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MVVGKLRYEE LRRQRLEENK KRMEQLHLPQ LSQALKKHSS TPTPSPVKRA TPRIIRTEMV  60
AVRRSNRVAN KPAPLYTEII TYERLELPRR NLKNGMYRRR DLSNRVYASD EARELAISKA  120
QEVESGLGGD YPTFLKPMTQ SHVTGGFWLG LPVHFCRRNL PRRDETVTLV DEEGEEYPTV  180
YLARKAGLSG GWRGFSIDHG LVDGDAIVFQ LIRPTVFKVY IIRANSFKVG NKDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.12e-63B3 family protein