PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028091871.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 331aa    MW: 36892.8 Da    PI: 5.108
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028091871.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH54.52.1e-174089255
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    r +h+e E+rRR++iN++f+ Lr+l+P++    ++K +Ka+ L ++++YI+ Lq
  XP_028091871.1 40 RSKHSETEQRRRSKINERFQILRDLIPQN----DQKRDKASFLLEVIQYIQFLQ 89
                    889*************************9....9*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MVRSVKSHHH EDEELVPRRA TDCSSQIDVK STDQKTNAVR SKHSETEQRR RSKINERFQI  60
LRDLIPQNDQ KRDKASFLLE VIQYIQFLQE KLQMYEGSYQ GWSQEPTKLM PWRNNCGPVE  120
SFIDQSQLMR NGSGQEDSIV VTPAMLTNAQ NSVESDLGEA AVYKALDNPA VAENQAIPIN  180
IPLQSSVLGD VPTQRCQAFV SDSEHLASQS QSQFWQSRPC TTESAVPSYT LNEEELKIES  240
GEASISNAYS QGLLNSLTEA LQSSGVDLTQ ASISVQLDVG KRANTGLTAT MFSAKDHQNQ  300
CPVSQSRTVY GVGSSCEDSD QAHKRLRTEH I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.17e-71bHLH family protein