PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028092013.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 197aa    MW: 21901.8 Da    PI: 5.2034
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028092013.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR130.31.3e-0986167788
            FAR1   7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 
                     ++++GF +++++s    +n++  + tf C k+g+ ++++k + +  r + ++++gC   l+ +k   +++w+++ l+  HnH+
  XP_028092013.1  86 GRKTGFVIVVKTSDAG-DNDRKPRLTFACEKSGYYRDNRKIKGELLRLTDSKKCGCPFLLREEKLPtNDEWMLHILSGVHNHP 167
                     5799*******99998.566699*************999998999999999******9999998888***************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MAALKKLDVP EDSPLKNADN LPLSFPPTPS QSEDGSESEE EALVRKTKDV VGAKPPTLNE  60
QVLDLTQDKE CEVPKDAPPE KASDVGRKTG FVIVVKTSDA GDNDRKPRLT FACEKSGYYR  120
DNRKIKGELL RLTDSKKCGC PFLLREEKLP TNDEWMLHIL SGVHNHPSAE HFEEHSFAGR  180
LAKEETSLLV DMSKSMV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.12e-06FAR1 family protein