PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028092029.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family HSF
Protein Properties Length: 215aa    MW: 24948.2 Da    PI: 9.6537
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028092029.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind97.81.1e-30311412102
                     HHHHHHHHHCTG...................GGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTT CS
    HSF_DNA-bind   2 Flkklyeilede...................elkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskek 77 
                     Fl+k+y++le+e                     +++++w+ +g+ fvv+ + ef++ +Lp+yFkh+nf+SF+RQLn+YgFkk+ +++        
  XP_028092029.1  31 FLSKTYDLLEEEeaervrrrseahgggdgsgGGRRVVTWNGEGTGFVVWSPAEFSELMLPRYFKHNNFSSFIRQLNTYGFKKTASKR-------- 117
                     999******9777888888888888888888999*************************************************9988........ PP

                     SEEEEESXXXXXXXXXXXXXXXXXX CS
    HSF_DNA-bind  78 iweFkhksFkkgkkellekikrkks 102
                      weF+h++F++g+++ll +i rkk 
  XP_028092029.1 118 -WEFQHEKFQRGRRDLLVEISRKKG 141
                     .*********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MATDFPDRQV GRKVGQPLPT PPPRTKCPAP FLSKTYDLLE EEEAERVRRR SEAHGGGDGS  60
GGGRRVVTWN GEGTGFVVWS PAEFSELMLP RYFKHNNFSS FIRQLNTYGF KKTASKRWEF  120
QHEKFQRGRR DLLVEISRKK GEPSAFPAYL RAAGENENAE EENNRLLLME ENKNLRKERI  180
ELELQIEHFK ALQTHLFECL SHYINNPQAK VRRLC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.15e-31HSF family protein