PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028092030.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 354aa MW: 40609.4 Da PI: 8.7569

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028092030.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.4	1.2e-52	10	134	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelv++yL++k++++++++ +i+e+d+yk++Pw+Lp ++ +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ + XP_028092030.1 10 LPPGFRFHPTDEELVMHYLCRKCAAQPISV-PIIAEIDLYKFDPWQLPGMAMYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGR- 102 79**************************.88***********6656689*********************************98. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++vg+kk Lvfy g+apkg+kt+W+mheyrl XP_028092030.1 103 -PKAVGIKKALVFYAGKAPKGVKTNWIMHEYRL 134 .778*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MTSSSSQLEL PPGFRFHPTD EELVMHYLCR KCAAQPISVP IIAEIDLYKF DPWQLPGMAM 60 YGEKEWYFFS PRDRKYPNGS RPNRAAGTGY WKATGADKPI GRPKAVGIKK ALVFYAGKAP 120 KGVKTNWIMH EYRLANVDRS AGKKNNLRLD DWVLCRIYNK KGAIEKHLNS TGPKPTQYLE 180 IEERKPEILS GYEAISMPPP RPPPSQPLMS NDLLHFETSD SVPRLHTDSS GSEHAGSPDF 240 MCDKEVQSEP RWNNDLENAL DFQFNYMDAF LDDSFASQMQ EFQQDQLSPL QDMFMFMPSH 300 LSRPIEKKKN TQFSPSVRPM KILIVGPKTF LSLKSYMKYS YMHTSHPAHV WVTF

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MTSSSSQLEL PPGFRFHPTD EELVMHYLCR KCAAQPISVP IIAEIDLYKF DPWQLPGMAM  60
YGEKEWYFFS PRDRKYPNGS RPNRAAGTGY WKATGADKPI GRPKAVGIKK ALVFYAGKAP  120
KGVKTNWIMH EYRLANVDRS AGKKNNLRLD DWVLCRIYNK KGAIEKHLNS TGPKPTQYLE  180
IEERKPEILS GYEAISMPPP RPPPSQPLMS NDLLHFETSD SVPRLHTDSS GSEHAGSPDF  240
MCDKEVQSEP RWNNDLENAL DFQFNYMDAF LDDSFASQMQ EFQQDQLSPL QDMFMFMPSH  300
LSRPIEKKKN TQFSPSVRPM KILIVGPKTF LSLKSYMKYS YMHTSHPAHV WVTF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01720.1	1e-133	NAC family protein