PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028092031.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NAC
Protein Properties Length: 301aa    MW: 34438.1 Da    PI: 6.6311
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028092031.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM169.98.4e-53101341128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeelv++yL++k++++++++  +i+e+d+yk++Pw+Lp ++  +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ + 
  XP_028092031.1  10 LPPGFRFHPTDEELVMHYLCRKCAAQPISV-PIIAEIDLYKFDPWQLPGMAMYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGR- 102
                     79****************************.88***************6656689*************************************98. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++vg+kk Lvfy g+apkg+kt+W+mheyrl
  XP_028092031.1 103 -PKAVGIKKALVFYAGKAPKGVKTNWIMHEYRL 134
                     .778***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MTSSSSQLEL PPGFRFHPTD EELVMHYLCR KCAAQPISVP IIAEIDLYKF DPWQLPGMAM  60
YGEKEWYFFS PRDRKYPNGS RPNRAAGTGY WKATGADKPI GRPKAVGIKK ALVFYAGKAP  120
KGVKTNWIMH EYRLANVDRS AGKKNNLRLD DWVLCRIYNK KGAIEKHLNS TGPKPTQYLE  180
IEERKPEILS GYEAISMPPP RPPPSQPLMS NDLLHFETSD SVPRLHTDSS GSEHAGSPDF  240
MCDKEVQSEP RWNNDLENAL DFQFNYMDAF LDDSFASQMQ EFQQDQLSPL QDMFMFMPKP  300
F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-135NAC family protein