PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028092090.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 198aa    MW: 22646.4 Da    PI: 8.4552
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028092090.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR172.59.5e-2331125190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHel 89 
                     +fYn+YAk  GFs+rks+ +++ ++g++++r + Cs+eg+r ++  +  +ek+r ++a tr+gCka+++++ +      gk++vt+++ +HnHel
  XP_028092090.1  31 DFYNAYAKAKGFSIRKSRFNTN-KEGKVVSRLWLCSREGQRLPKYLDrvAEKSRAPKALTRVGCKAQFRIRYDAdvgeGGKYVVTHFVADHNHEL 124
                     6*****************9999.666699999*********99988877899999****************988777789**************9 PP

            FAR1  90 a 90 
                     a
  XP_028092090.1 125 A 125
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MVDDAHRNDM VGDVERAILE HKFDSAEDGE DFYNAYAKAK GFSIRKSRFN TNKEGKVVSR  60
LWLCSREGQR LPKYLDRVAE KSRAPKALTR VGCKAQFRIR YDADVGEGGK YVVTHFVADH  120
NHELAEQHCV MYLRSHRSLN SADKAQAMAM RNVGVKTSQI MDYMVNQSGS YENVGFIRTY  180
LHNHIQVERR AEVEDGDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-23FAR1 family protein