PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028092207.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 254aa MW: 27963.8 Da PI: 8.1219

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028092207.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37	6.1e-12	61	107	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+h+e+ErrRR+riN +++Lr+l+P K++Ka+ L ++++ +k+L XP_028092207.1 61 RNHSEAERRRRERINGHLATLRSLIPGT-----NKMEKASLLAEVINNLKEL 107 58***********************6.....5**********999988 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MEFSSSFDGV SRIYGFQDII RGGSSSSSSL VLDGERGELV KAMVTAGQKG VKAEKALAAL 60 RNHSEAERRR RERINGHLAT LRSLIPGTNK MEKASLLAEV INNLKELRRN AAEATKGILV 120 PMDIDEVKVE QQEDGSDGAS CAIRASLCCD YKHEILSDLR EALDALNLKK VTAEIATLGS 180 RMIYVFVIAC CKEGKAEDNE GCQVLASSIR RALRSVLDKF YASEEISSRN TLSNKRRRVP 240 FFESSHSSSL GDFW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	67	72	ERRRRE
2	235	239	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	4e-32	bHLH family protein