PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028092442.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 534aa MW: 61647.4 Da PI: 7.2258

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028092442.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.8	4.2e-24	70	156	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Yn+YA ++GFs+rk k ++ + +++i +r+f C keg++ +e+ e+++ +r etrtgCka ++++ e dg w+vt ++ eHnHela XP_028092442.1 70 LYNNYALRMGFSIRKGKPRYYSGSKNIRQREFLCCKEGFKVDEDPF-EEKKLNRLETRTGCKAFVRLTVE-DGIWRVTAFNPEHNHELA 156 6****************999****************9999.99999*************9.**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 534 aa Download sequence
MAHDEDLPQS TVDGQTPEGG GRYEGIIAEI NTSNDVERGE RDCMFVARQE NNDDNLLDKV 60 VYSEDEAYAL YNNYALRMGF SIRKGKPRYY SGSKNIRQRE FLCCKEGFKV DEDPFEEKKL 120 NRLETRTGCK AFVRLTVEDG IWRVTAFNPE HNHELALQSE RHLLRSARHI SKPKAGVINS 180 MINAGISTKN AYSYLREEVG GSENVGFTKR DCYNYVNKQK MTMISAGDAQ SLLNHFKQKH 240 TEDPMFFFTV QVDQENRMTN FFWRDGRSRV DYDCFGDVVV FDTTYRTNKY NLICAPFVGV 300 NHHWQNVMFG CAFLLDETTD SFIWLFKSFL ESMGNRSPVT IFTDQDQAMS NAIQVVFPNT 360 HHRLCLWHIS KNAPSHLGEL NTNTEFKYLF NKCQKYCDST LEFQQTWDNV IQKFSLESHR 420 WLNMMYKIRH KWSTAFTKDS FNAKFKASSR SESTNNVLNN IAGKTTSLTN FVIEYDNLVA 480 GMHSSELDED FRCKQGAPQK AVKKSGILGH AAQVYTCKIF KLFENEFLNS LAMV

Sequence ? help Back to Top

Protein Sequence Length: 534 aa Download sequence

MAHDEDLPQS TVDGQTPEGG GRYEGIIAEI NTSNDVERGE RDCMFVARQE NNDDNLLDKV  60
VYSEDEAYAL YNNYALRMGF SIRKGKPRYY SGSKNIRQRE FLCCKEGFKV DEDPFEEKKL  120
NRLETRTGCK AFVRLTVEDG IWRVTAFNPE HNHELALQSE RHLLRSARHI SKPKAGVINS  180
MINAGISTKN AYSYLREEVG GSENVGFTKR DCYNYVNKQK MTMISAGDAQ SLLNHFKQKH  240
TEDPMFFFTV QVDQENRMTN FFWRDGRSRV DYDCFGDVVV FDTTYRTNKY NLICAPFVGV  300
NHHWQNVMFG CAFLLDETTD SFIWLFKSFL ESMGNRSPVT IFTDQDQAMS NAIQVVFPNT  360
HHRLCLWHIS KNAPSHLGEL NTNTEFKYLF NKCQKYCDST LEFQQTWDNV IQKFSLESHR  420
WLNMMYKIRH KWSTAFTKDS FNAKFKASSR SESTNNVLNN IAGKTTSLTN FVIEYDNLVA  480
GMHSSELDED FRCKQGAPQK AVKKSGILGH AAQVYTCKIF KLFENEFLNS LAMV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-106	FAR1 family protein