PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028092483.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 306aa    MW: 33748.6 Da    PI: 10.2224
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028092483.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.23e-13117162454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     +h+++E+rRRdriN  ++ Lr+l+Pk+      K++Ka+ L  +ve++k+L
  XP_028092483.1 117 SHSQAEKRRRDRINAQLSILRKLIPKS-----DKMDKAALLGSVVEHVKDL 162
                     8*************************8.....7****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MSNKKQRDIN LIVVRFERPK GLVGCWTMAN SCSSLGWAAK SAKLNQGNSS FVAPNPIRKA  60
CSSNECESTC FPQHVHNHGL GLGHGHGGNI PSCSFGVEGI FKEHHRAAAT IASNINSHSQ  120
AEKRRRDRIN AQLSILRKLI PKSDKMDKAA LLGSVVEHVK DLKRKAMEIS KVITVPTDVD  180
EVTINYYYLD DDDQDGRRRR RSSTIINGNN VFIKASVCCD DRPELFAELT QALGGLKLST  240
VRADMACLGG RIKSILVLCT KDSKEVVSMN NVIQSLNGVL NRIASSSTGS NHRVKSKRQR  300
FFLPSY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1295300KSKRQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.12e-42bHLH family protein