PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028092576.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 257aa    MW: 30101.2 Da    PI: 9.9011
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028092576.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.38.7e-192168148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd ll+++vk++G g+W+t+a+  g++R +k+c+ rw +yl
   XP_028092576.1 21 KGPWTAEEDRLLIEYVKLHGEGRWNTVASLAGLKRNGKSCRFRWVNYL 68
                     79********************************************97 PP
2Myb_DNA-binding51.72e-1674118147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg  T+ E+ +++d+++++G++ W+ Iart++ gRt++++k++w+++
   XP_028092576.1  74 RGQITPHEETIILDLHARWGNR-WSMIARTLP-GRTDNEIKNYWRTH 118
                      7888******************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MSWGAMAKHL GWDVIEQEWR KGPWTAEEDR LLIEYVKLHG EGRWNTVASL AGLKRNGKSC  60
RFRWVNYLRP DLKRGQITPH EETIILDLHA RWGNRWSMIA RTLPGRTDNE IKNYWRTHFK  120
KKSKASPNNN EKAKARLLRK QQFQQQQQQQ QQRRQQINQV DMKKRMSYLL DENENGVPSL  180
AHQVRQEMAT TMNPNTADEQ GLLYSMFIGY AYVPEPPKED NILWEGLWNL DDNAHGNLGM  240
ACAPNKACLH SLSTPFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24310.16e-87MYB family protein