PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028092676.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 179aa    MW: 20630.6 Da    PI: 9.7111
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028092676.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR136.31.9e-111197190
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                    +fY +YAk++ F v  ++++   ++ge++     C++  kr+++++   +  +++ ++ ++Ckak++ +++kdg++++t+++ eH+ +l 
  XP_028092676.1 11 SFYAKYAKHLEFAVAYRTQNIG-QDGEVKYFGVECTRARKRTKQSEV--HPLEPSLSSFIECKAKVRATLQKDGRFKLTTVVFEHTYDLI 97
                    5*************99988876.8999**************998866..9999********************************99886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MCFSSKQEVY SFYAKYAKHL EFAVAYRTQN IGQDGEVKYF GVECTRARKR TKQSEVHPLE  60
PSLSSFIECK AKVRATLQKD GRFKLTTVVF EHTYDLIPSD SRHFAMNKRI LTPVKRRLEI  120
NDEAGIGMAR NFHSIIVEAG GYEALTFDEQ DARNHIQSMR RLRLGIGDVA SVALYFHRM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-13FAR1 family protein