PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028092748.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 446aa MW: 51503.1 Da PI: 7.9742

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028092748.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	46.4	1.3e-14	37	123	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY +YAk+ GF + ++++ ++ge + C++ r++++k + +++ +++ +Ckak++ +++kdg++++t+++leH+H+l+p XP_028092748.1 37 FYAKYAKHFGFAIAYGTQNYD-NDGELKYFGIECTRARMRRKRSKV--NPLEPSLSSKNDCKAKVRGSLQKDGTFKLTTVVLEHTHDLVP 123 9*************99997.8999***********99887..9999*********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MEGSNNPSQE GEEPESGEVE EPKQGMCFTS KQEVYAFYAK YAKHFGFAIA YGTQNYDNDG 60 ELKYFGIECT RARMRRKRSK VNPLEPSLSS KNDCKAKVRG SLQKDGTFKL TTVVLEHTHD 120 LVPSDSRHFS MNKRILTPVK RRLEINDEAG IGVARNFHSM VVEAGGFEAL TFDERDARNH 180 IDKARRLRLG VGDAESVAFY FHRMQQQNSN FYSEMDFDGE GRLRNLFWAD ARSRAAYKAF 240 GDVVTFDTTY LTNKYDMPFA PFVGVNHHGQ SILFGCGLLC NENTETFVWL FRAWLSCMSN 300 TPLNAIITDQ CKAMQNAIQI VFPQARHRWC LWHILKKIPE KLRACSQYES IKFALQKAVY 360 ESFTKNEFDE EWQAMISKFG LHDNDWLGGL YDERHRWIPA YVKDMFWAGM STTQRSKSMN 420 AFFDGYVNSK TTLKQFVEQY DNALRS

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MEGSNNPSQE GEEPESGEVE EPKQGMCFTS KQEVYAFYAK YAKHFGFAIA YGTQNYDNDG  60
ELKYFGIECT RARMRRKRSK VNPLEPSLSS KNDCKAKVRG SLQKDGTFKL TTVVLEHTHD  120
LVPSDSRHFS MNKRILTPVK RRLEINDEAG IGVARNFHSM VVEAGGFEAL TFDERDARNH  180
IDKARRLRLG VGDAESVAFY FHRMQQQNSN FYSEMDFDGE GRLRNLFWAD ARSRAAYKAF  240
GDVVTFDTTY LTNKYDMPFA PFVGVNHHGQ SILFGCGLLC NENTETFVWL FRAWLSCMSN  300
TPLNAIITDQ CKAMQNAIQI VFPQARHRWC LWHILKKIPE KLRACSQYES IKFALQKAVY  360
ESFTKNEFDE EWQAMISKFG LHDNDWLGGL YDERHRWIPA YVKDMFWAGM STTQRSKSMN  420
AFFDGYVNSK TTLKQFVEQY DNALRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	9e-97	FAR1 family protein