PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028092783.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 531aa MW: 59885.9 Da PI: 8.3253

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028092783.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.9	7.5e-13	352	396	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h + Er+RR+++N++f+ Lr+llP+ +K +Ka++L ++eY+ sL XP_028092783.1 352 HMISERKRREKLNDSFQALRSLLPPG-----TKKDKASVLAGTTEYLTSL 396 8899******************97.....8*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 531 aa Download sequence
MDSIFHLDDG ARARFLQEIV HSFGFTYICL WLYVPQPSHC LISMDGFHNE ENKQPSSSSG 60 SVARRLFDEY RQRIFNFQNG RVPGVVFKNG LHYMELKELE LQGLASVDVQ LQFYREARIK 120 TAIFMGCTTG EIELGMSNDP QMNLEMEMKN WFLEDFSRPA RPPIELPPHP TDQNRPSSSS 180 SSLRSLSTDS PEPSPFLFNI PSTSYLPEPP MESNIEQALR PISTSSISPL EHTTQAFRHI 240 LNPQFPSQQE SNEASAMAKA FLTVISSSAS PSSSSSSHQR LPQTVPPNYP LSQKTGAFKS 300 YRSSLGALTP LTARARRQNL QKRAISFFRT LSLMKIQERV QGTRPTSTQL HHMISERKRR 360 EKLNDSFQAL RSLLPPGTKK DKASVLAGTT EYLTSLKAQV AELTKRTQSL EAQILPPREA 420 NEEVSVPSSS SSNQRLDVLI TNVSELTSES RIIDLQVIVR RDCNMLDLVI RIMEFLKQVK 480 NVNLISVEAD TRVVETNSIN RVVLRLRIEG GDWDESSFQE AVRRVVADLA Q

Sequence ? help Back to Top

Protein Sequence Length: 531 aa Download sequence

MDSIFHLDDG ARARFLQEIV HSFGFTYICL WLYVPQPSHC LISMDGFHNE ENKQPSSSSG  60
SVARRLFDEY RQRIFNFQNG RVPGVVFKNG LHYMELKELE LQGLASVDVQ LQFYREARIK  120
TAIFMGCTTG EIELGMSNDP QMNLEMEMKN WFLEDFSRPA RPPIELPPHP TDQNRPSSSS  180
SSLRSLSTDS PEPSPFLFNI PSTSYLPEPP MESNIEQALR PISTSSISPL EHTTQAFRHI  240
LNPQFPSQQE SNEASAMAKA FLTVISSSAS PSSSSSSHQR LPQTVPPNYP LSQKTGAFKS  300
YRSSLGALTP LTARARRQNL QKRAISFFRT LSLMKIQERV QGTRPTSTQL HHMISERKRR  360
EKLNDSFQAL RSLLPPGTKK DKASVLAGTT EYLTSLKAQV AELTKRTQSL EAQILPPREA  420
NEEVSVPSSS SSNQRLDVLI TNVSELTSES RIIDLQVIVR RDCNMLDLVI RIMEFLKQVK  480
NVNLISVEAD TRVVETNSIN RVVLRLRIEG GDWDESSFQE AVRRVVADLA Q

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	356	361	ERKRRE
2	357	362	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	5e-74	bHLH family protein