PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028093071.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 575aa MW: 66810.7 Da PI: 8.5665

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028093071.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	57.1	6.1e-18	12	97	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY +YAk+vGFs+ +++ ++ge + Cs++gkr ++++ + +++ +t+++Cka+++ ++++dg++++t+++leHnH+l XP_028093071.1 12 FYAKYAKHVGFSIACKTQVIG-DDGELRYFEIECSRSGKRIKKSEV--NPLKPSLSTKIDCKARVRASLQTDGRFMLTTVNLEHNHDLI 97 9***********9988776.8999**********998766..999**********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 575 aa Download sequence
MCFTSKQEVY IFYAKYAKHV GFSIACKTQV IGDDGELRYF EIECSRSGKR IKKSEVNPLK 60 PSLSTKIDCK ARVRASLQTD GRFMLTTVNL EHNHDLIPTD SRHFAMNKKI LSPVKRRLEI 120 NDQAGIGVFR NYNSMVVEAG GYESLTFDER DARNYIERAR KLRLGEGDSD ALQKYFLRMH 180 AQNSSFYYMI DVDTDFRIRN LFWADTMSRT AYEEFGDVVS FDTTYLTNKY DMPFAPFVGV 240 NHHGQSILLG CGLLSSEDTD TFVWLFKCWL NCMPDHPPKA IITDQCKAMQ KAIEIVFPNA 300 RHRWCLWHIM KKIPEKLKGY SQYESMKMDL QNAVYGTFTK DEFEMKWKEM IAKFNLYENQ 360 WLGVLYDERH RWVPVYVKDI FWAGMSTTQR KKEKKADFKS RHKVFDCLTV YGFEKQFQDA 420 YTNAKFKEVQ AEMKRLVYCQ PFLVKEEGSI CTYFVKEAVV VFGKMKHVDF VVYYNSTEFD 480 VQWKIKLIDR GLDEIKTKVM KDDEGGGSNV VPSTSNVPPI TSNVPSSPIG NINRKGTKVI 540 GGEGEGQCQY QPERNVRREL YPYMVGMENS MCVPI

Sequence ? help Back to Top

Protein Sequence Length: 575 aa Download sequence

MCFTSKQEVY IFYAKYAKHV GFSIACKTQV IGDDGELRYF EIECSRSGKR IKKSEVNPLK  60
PSLSTKIDCK ARVRASLQTD GRFMLTTVNL EHNHDLIPTD SRHFAMNKKI LSPVKRRLEI  120
NDQAGIGVFR NYNSMVVEAG GYESLTFDER DARNYIERAR KLRLGEGDSD ALQKYFLRMH  180
AQNSSFYYMI DVDTDFRIRN LFWADTMSRT AYEEFGDVVS FDTTYLTNKY DMPFAPFVGV  240
NHHGQSILLG CGLLSSEDTD TFVWLFKCWL NCMPDHPPKA IITDQCKAMQ KAIEIVFPNA  300
RHRWCLWHIM KKIPEKLKGY SQYESMKMDL QNAVYGTFTK DEFEMKWKEM IAKFNLYENQ  360
WLGVLYDERH RWVPVYVKDI FWAGMSTTQR KKEKKADFKS RHKVFDCLTV YGFEKQFQDA  420
YTNAKFKEVQ AEMKRLVYCQ PFLVKEEGSI CTYFVKEAVV VFGKMKHVDF VVYYNSTEFD  480
VQWKIKLIDR GLDEIKTKVM KDDEGGGSNV VPSTSNVPPI TSNVPSSPIG NINRKGTKVI  540
GGEGEGQCQY QPERNVRREL YPYMVGMENS MCVPI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	5e-96	FAR1 family protein