PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028093232.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 308aa    MW: 32823.3 Da    PI: 6.1661
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028093232.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.21.1e-11207252555
                     HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     h+++Er RR+ri +++  L+el+P+ +      K +Ka++L + ++Y+k Lq
  XP_028093232.1 207 HSIAERLRRERIAERMKSLQELVPNgN------KTDKASMLDEIIDYVKFLQ 252
                     99***********************55......******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MQPCSREMQA MNSILNQTQM SLQDLQNGQI VNTQIQHLDP NSSDEDFLHQ MLSTVPSCSW  60
PDLAGANPKS LWDISSNTMS ATMMGSHKSL DMASSDDQDQ FHFDHDQSEA LASKLQQHQI  120
SPFSSFKPPN LGCDGSIQAL YNGFAGSLHS TGQTSNQAQQ FHHPQNFGAA SPVINQAAAA  180
SGAAGGGAAG QPRQRVRARR GQATDPHSIA ERLRRERIAE RMKSLQELVP NGNKTDKASM  240
LDEIIDYVKF LQLQVKVLSM SRLGGAAAVG PLVADMSSEG GGGDCIQASG GGRGGNGTQT  300
ASTSNNNE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1212217RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30980.11e-24bHLH family protein