PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028093313.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family HSF
Protein Properties Length: 240aa    MW: 27829.3 Da    PI: 5.3361
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028093313.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind110.21.4e-34221132102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl k+y ++ed++++++isw+++g++fvv+++ efa+++Lp++Fkhsnf+SFvRQLn+YgF+kv +++         weF ++ F+kg+++ll++
  XP_028093313.1  22 FLLKTYMLVEDPTTDQVISWNSEGTAFVVWQPAEFARDLLPTFFKHSNFSSFVRQLNTYGFRKVATSR---------WEFCNDMFRKGERDLLCE 107
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k 
  XP_028093313.1 108 IRRRKA 113
                     ***985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MEVECEKGLF EYVLRKSSPP PFLLKTYMLV EDPTTDQVIS WNSEGTAFVV WQPAEFARDL  60
LPTFFKHSNF SSFVRQLNTY GFRKVATSRW EFCNDMFRKG ERDLLCEIRR RKAWTNKSQS  120
QPAPPTQSLP KESDEDQRSS STSSSSGYSN LMDENKRLKR ENGVLSSELS GMKRKCTELI  180
DLVAMYARSE KEEEDEEEEE EDDRPKLFGV RLKVEGDMER KRKRANISET ASVLLSQSCK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41690.11e-70HSF family protein