PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028093332.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 234aa    MW: 25872.5 Da    PI: 8.8226
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028093332.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.95.7e-1177124454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++  rE+ RRdr+N++f eL ++l +    + +K +Ka+iL +A++ + +L
  XP_028093332.1  77 SKACREKLRRDRLNDKFVELGSILEPG---RPPKTDKAAILVEAIRLVIQL 124
                     6789**********************8...89*************987776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MVSPEHTNWL FDYGLIEDIS VPDPNFSAPT SGFCWPLNAS SNVGLEIDGS FGDSDSRKET  60
GSKKRPRPES CGASSSSKAC REKLRRDRLN DKFVELGSIL EPGRPPKTDK AAILVEAIRL  120
VIQLRGDAQK LKDSNLTLQE KIKELKAEKN ELRDEKQRLK AEKERLEQQL KTMNAQPGFV  180
PRPPAIPATY AAQGQPAGNK LVPIISYPGV AMWQFMPPAS VDTSQDHVLR PPVA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16468KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-110bHLH family protein