PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028093396.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YC
Protein Properties Length: 135aa    MW: 15370.4 Da    PI: 7.5241
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028093396.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC49.59.4e-16121011399
           NF-YC  13 atdfk..nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivprd 99 
                     ++d++    ++P +r+kki+k d+d++++ +ea  l+s + +lf+  l+ +s   a e+kr+t+k   +  av+r + + dfl+d  p +
  XP_028093396.1  12 NNDIEtiSPTFPNSRVKKIMKLDKDINKVNSEALFLISCSTDLFLQFLAEKSARVAIEKKRKTIKLEHLRVAVKRHQpTSDFLLDSLPMS 101
                     4444433678***************************************************************9976489*****99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    
MADEEEDEEN NNNDIETISP TFPNSRVKKI MKLDKDINKV NSEALFLISC STDLFLQFLA  60
EKSARVAIEK KRKTIKLEHL RVAVKRHQPT SDFLLDSLPM SSQPADRPPE ARTRSAEKPV  120
PAGTRRIDDF FQKGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43250.19e-52NF-YC family protein