PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028093419.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 618aa MW: 72081.3 Da PI: 8.4345

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028093419.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	77.5	2.5e-24	24	112	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r+ + +ks ++g+it+r+fvC+keg+r +k++ ++++r+e rtgC+a+l++k ++ +k+ v++++++HnH ++ XP_028093419.1 24 DFYNTYGGRLGFSIRRGYINKS-KEGQITSRQFVCNKEGFRVVDKRD-PLTKNPRQEVRTGCQARLVIKWDRnMQKFFVSDFVEQHNHIFV 112 6******************9.6667************9999.999**************999899***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 618 aa Download sequence
MTRVSVIGSL EFALMSDTEQ EAYDFYNTYG GRLGFSIRRG YINKSKEGQI TSRQFVCNKE 60 GFRVVDKRDP LTKNPRQEVR TGCQARLVIK WDRNMQKFFV SDFVEQHNHI FVPTECTHML 120 PSQRKISASQ AIEIDLVEKS GIRLNAAFEL MGNEVGGRES LGFTKLDQKN YLRTKRQNSL 180 AYGEAGSILQ YFRDKSLENP SFFYSVQLDN EEQITNIFWA DAQIIMDYGQ FGDVVTFDTT 240 YKLNSAHRPL ASFVGFNHHR KTVIFGAALM YDETADSFVW IFRRFLEAMS SKAPKIIFTD 300 QDAAMAKAIP IVMPNTTHRL CTWHLMQNAL RHANSIFKDK AVKDKGMKSV LSKFMYDIED 360 EEEFTLKWEE MLDKYEVRDN HWLKLTFGVK EKWGWPYVKN AWGAGMSSTQ LSESFNAFLK 420 DFIQSDHNLM QFFMHFDRVL SEKRYKELQA EYALSQKLPR VNIKVKIMEQ AADVYTNKIF 480 EKFQDEYVKS LEVNIEEIEN DGESTVYAVL DSDGIKVRKV RQECDDSVTC SCRKFEMKGI 540 LCSHCLKILR ERLKFKEIPS QYILKRWTKK ARSENVKDRC GHDIQVDVRL HQTSRYRSLM 600 AIFRSVACRA SESEETYN

Sequence ? help Back to Top

Protein Sequence Length: 618 aa Download sequence

MTRVSVIGSL EFALMSDTEQ EAYDFYNTYG GRLGFSIRRG YINKSKEGQI TSRQFVCNKE  60
GFRVVDKRDP LTKNPRQEVR TGCQARLVIK WDRNMQKFFV SDFVEQHNHI FVPTECTHML  120
PSQRKISASQ AIEIDLVEKS GIRLNAAFEL MGNEVGGRES LGFTKLDQKN YLRTKRQNSL  180
AYGEAGSILQ YFRDKSLENP SFFYSVQLDN EEQITNIFWA DAQIIMDYGQ FGDVVTFDTT  240
YKLNSAHRPL ASFVGFNHHR KTVIFGAALM YDETADSFVW IFRRFLEAMS SKAPKIIFTD  300
QDAAMAKAIP IVMPNTTHRL CTWHLMQNAL RHANSIFKDK AVKDKGMKSV LSKFMYDIED  360
EEEFTLKWEE MLDKYEVRDN HWLKLTFGVK EKWGWPYVKN AWGAGMSSTQ LSESFNAFLK  420
DFIQSDHNLM QFFMHFDRVL SEKRYKELQA EYALSQKLPR VNIKVKIMEQ AADVYTNKIF  480
EKFQDEYVKS LEVNIEEIEN DGESTVYAVL DSDGIKVRKV RQECDDSVTC SCRKFEMKGI  540
LCSHCLKILR ERLKFKEIPS QYILKRWTKK ARSENVKDRC GHDIQVDVRL HQTSRYRSLM  600
AIFRSVACRA SESEETYN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-126	FAR1 family protein