PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028093467.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 219aa    MW: 25012.1 Da    PI: 9.693
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028093467.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3102.52.4e-32107206196
                     EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                     f+k+ tpsdv+k++rlv+pk++ae+h    ++ + +++ l ++d  g++W+++++y+++s++yvltkGW++Fvk++ Lk+gD+v F+++  s+ +
  XP_028093467.1 107 FEKAVTPSDVGKLNRLVIPKQHAEKHfplqSETTSKGVLLNFKDVAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKSLKAGDIVSFYRSTGSDNQ 201
                     89*************************9986677799**************************************************88668888 PP

                     .EEEE CS
              B3  92 lvvkv 96 
                     l++ +
  XP_028093467.1 202 LFIDW 206
                     88877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MAKELRYRPS NNYYSKVSGY SGLELLKSDV DVLMLGTYVD ENRVIDVYIG HNLDDNSVIH  60
TYNDELEQSR KNYIGGFINN NGNKKACCNE KSTTNYKNNV KATEQLFEKA VTPSDVGKLN  120
RLVIPKQHAE KHFPLQSETT SKGVLLNFKD VAGKVWRFRY SYWNSSQSYV LTKGWSRFVK  180
EKSLKAGDIV SFYRSTGSDN QLFIDWKPRN GSNPVVQPG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13260.13e-64RAV family protein