PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028093634.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family AP2
Protein Properties Length: 121aa    MW: 14135.7 Da    PI: 11.4155
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028093634.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP223.31.6e-0771101129
             AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng.krk 29 
                     s y+GV++++++gr++A+++d  s+n  ++k
  XP_028093634.1  71 SIYRGVTRHRWTGRFEAHLWDkSSWNSiQNK 101
                     57*******************7777877443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    
MKRSPSSCWS SSSTSSVESD LHPAHHHDDQ SAQRKPKAKR PRSRPRGAIN KNLNQSTSQK  60
IINPNSPRRS SIYRGVTRHR WTGRFEAHLW DKSSWNSIQN KKGRQSEYLY LYLYHQSSIF  120
N
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13340QRKPKAKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.33e-23AP2 family protein