PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028093665.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MIKC_MADS

Protein Properties

Length: 208aa MW: 23703.4 Da PI: 9.8113

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028093665.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	81.8	4.3e-26	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krie+ks rqvtfskRr g+ KKA LSvLCd++va+++fss+gkly ++s XP_028093665.1 9 KRIESKSSRQVTFSKRRGGLVKKARDLSVLCDVDVALLVFSSRGKLYQFCS 59 79***********************************************96 PP
2	K-box	54.9	3.7e-19	93	170	22	99
K-box 22 akLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 a + e Lq ++Rhl +++Ls+ +L qLe++ + +l++i+s+K+ l++e+i l +ke+ lqeenk L ++++ XP_028093665.1 93 ASFRTISELLQITKRHLEEPYVDQLSVTDLIQLEKEFDAALTQIKSRKTLLMMESIMALHEKERILQEENKLLANQIA 170 566777899*****************************************************************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence
MGRKKVEMKR IESKSSRQVT FSKRRGGLVK KARDLSVLCD VDVALLVFSS RGKLYQFCSA 60 NNSMAKILKQ YHHHSGAKGR FSTGDCEAES RFASFRTISE LLQITKRHLE EPYVDQLSVT 120 DLIQLEKEFD AALTQIKSRK TLLMMESIMA LHEKERILQE ENKLLANQIA AMETNGNKVE 180 NKVVMASNDD LGNKYMNCHS QQPILHLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65050.2	1e-46	MIKC_MADS family protein