PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028093713.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

CAMTA

Protein Properties

Length: 1008aa MW: 112711 Da PI: 6.2254

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028093713.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	169.4	5.5e-53	13	127	3	116
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwlk+ e++ iL+n+++ +lt+e++++p sgs++L+n++++r+frkDG+sw+kkkdg++v E+he+LKvg+ve+l+cyYah+e+np+fqr XP_028093713.1 13 REaHTRWLKPAEVLFILQNYKEEQLTHEPPKKPASGSVFLFNKRVLRFFRKDGHSWRKKKDGRAVGEAHERLKVGNVEALNCYYAHGEQNPNFQR 107 55599**************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhyle 116 r++w+L+ ++e+ivlvhy+e XP_028093713.1 108 RSFWILDPAYEHIVLVHYRE 127 ****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1008 aa Download sequence
MTQSGYNIND LVREAHTRWL KPAEVLFILQ NYKEEQLTHE PPKKPASGSV FLFNKRVLRF 60 FRKDGHSWRK KKDGRAVGEA HERLKVGNVE ALNCYYAHGE QNPNFQRRSF WILDPAYEHI 120 VLVHYREISE GRHSSGSISQ LSPESPSTFS QSPNCYTAQH PGSTIVSELY EPHQSPGSVE 180 VSSDAVVKSN GMDHLDWIER KGEMSSSSEL EVSQALRRLE EQLSLNDDSL EEIGPFCSEN 240 ENSNDSECVI NDQYKSSASL DDVNTLALGR ESGGNEKHNH QALAQEFMVE RKGSLSWKEM 300 LEFNGSSPGA ESQEKTLHSS DGNGMLLPHS RSSMLEEQEI CQWINFGRHY SNKHNDFPTS 360 GNDKNLQLSA PSKYPTSSES PLALPASILL SQEIENFRFP SYSTVENNHH YFTELFDQGQ 420 IGIHLEADSS LTIAQKQKFT IREISPDWGY AGEATKVVIV GSFLCDPSEG AWTCMFGDIE 480 VPVQIIQEGV ICCLAPPRLP GKVTLCITSA NRESCSEVRE FEYHAKPSSC AHCSSSMKET 540 TKSPDELLLL VRFVRMLLSD PSVQKGDNTE SGIYLWDKFK ADEDSWDRVI EALLFGNWTS 600 SSTTDWLLQE LLKDKLQQWL SSRSRGGCNQ PGCSLSKKEQ GIIHMVAGLG FEWALNAILN 660 SGVSVNFRDI NGWTALHWAA QFGREKMVAS LIASGASAGA VTDPTSQDPT GKTPAFIAST 720 NGHKGLAGYL SEVELTSHLS SLKLVENELS KGSAEVEAES AVNSISQRSV ATNEDHLSLK 780 DTLAALRNTA QAAARIQAAF RAHSFKKRQQ RDASSAAAVA SVDEYSILSN DIQGISVASK 840 LAFRNARDYN TAALSIQKKF RGWKGRKDFL AFRQKVVTIQ AHVRGHQVRK QYKVFCWAVG 900 VLEKVVLRWR RKRAGLRGFR HETESIDESE DEDILKVFRK QKVEGAIDEA ISRVRSMVDS 960 PDARQQYCRM LERYRQAKAE LDGTESEVTS TSQSDVCYMD NEDTYQYP

Sequence ? help Back to Top

Protein Sequence Length: 1008 aa Download sequence

MTQSGYNIND LVREAHTRWL KPAEVLFILQ NYKEEQLTHE PPKKPASGSV FLFNKRVLRF  60
FRKDGHSWRK KKDGRAVGEA HERLKVGNVE ALNCYYAHGE QNPNFQRRSF WILDPAYEHI  120
VLVHYREISE GRHSSGSISQ LSPESPSTFS QSPNCYTAQH PGSTIVSELY EPHQSPGSVE  180
VSSDAVVKSN GMDHLDWIER KGEMSSSSEL EVSQALRRLE EQLSLNDDSL EEIGPFCSEN  240
ENSNDSECVI NDQYKSSASL DDVNTLALGR ESGGNEKHNH QALAQEFMVE RKGSLSWKEM  300
LEFNGSSPGA ESQEKTLHSS DGNGMLLPHS RSSMLEEQEI CQWINFGRHY SNKHNDFPTS  360
GNDKNLQLSA PSKYPTSSES PLALPASILL SQEIENFRFP SYSTVENNHH YFTELFDQGQ  420
IGIHLEADSS LTIAQKQKFT IREISPDWGY AGEATKVVIV GSFLCDPSEG AWTCMFGDIE  480
VPVQIIQEGV ICCLAPPRLP GKVTLCITSA NRESCSEVRE FEYHAKPSSC AHCSSSMKET  540
TKSPDELLLL VRFVRMLLSD PSVQKGDNTE SGIYLWDKFK ADEDSWDRVI EALLFGNWTS  600
SSTTDWLLQE LLKDKLQQWL SSRSRGGCNQ PGCSLSKKEQ GIIHMVAGLG FEWALNAILN  660
SGVSVNFRDI NGWTALHWAA QFGREKMVAS LIASGASAGA VTDPTSQDPT GKTPAFIAST  720
NGHKGLAGYL SEVELTSHLS SLKLVENELS KGSAEVEAES AVNSISQRSV ATNEDHLSLK  780
DTLAALRNTA QAAARIQAAF RAHSFKKRQQ RDASSAAAVA SVDEYSILSN DIQGISVASK  840
LAFRNARDYN TAALSIQKKF RGWKGRKDFL AFRQKVVTIQ AHVRGHQVRK QYKVFCWAVG  900
VLEKVVLRWR RKRAGLRGFR HETESIDESE DEDILKVFRK QKVEGAIDEA ISRVRSMVDS  960
PDARQQYCRM LERYRQAKAE LDGTESEVTS TSQSDVCYMD NEDTYQYP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	CAMTA family protein