PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028093949.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB_related

Protein Properties

Length: 199aa MW: 23533.5 Da PI: 5.4019

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028093949.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.6	1.4e-18	26	66	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 W++eE+ +l+++++qlG++ W++Iar+m+ gRt++ +k++w+ XP_028093949.1 26 IWSEEEEMKLIEVHRQLGNK-WAAIAREMP-GRTENTIKNHWN 66 6*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 199 aa Download sequence
MLNGRMGKQC RERWHNHLRP DIKKDIWSEE EEMKLIEVHR QLGNKWAAIA REMPGRTENT 60 IKNHWNATKR RRISKRKRQH SSLLQDYIKS LPSDSTVTDG QESLSSDSIL RIIDNTDLEE 120 DNKDQKDPTS HSDKAVDYQI YEKMAVEEDD FGSMHNESYK VKLEMEMEMM PAELMDKEMS 180 FDVNNKDMDL LEMHCQGIF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	69	73	KRRRI
2	69	78	KRRRISKRKR
3	71	77	RRISKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	1e-43	MYB family protein