PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028093953.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 366aa    MW: 40261.8 Da    PI: 5.3749
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028093953.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH52.21.1e-16151198355
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +ahn  E+rRR+riN+++  L++l+P++      K +Ka++L +A++Y+k+Lq
  XP_028093953.1 151 EAHNLSEKRRRSRINEKLKALQKLIPNS-----NKTDKASMLDEAIDYLKQLQ 198
                     69*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    
MIVMADMYNI ACSSSSSPPE PDDISLFLHQ FLLRSSSSSS PPSSYSLMPH KPNPMHSSSP  60
FHTLPENPNR SIPPSLLSGS ERRVSAVDSS SGGFFPVNAT NVSCSSAGTL DNDPPDEYDF  120
ESEEGFEALV GDVPAKPVPP RTPSKRSRAA EAHNLSEKRR RSRINEKLKA LQKLIPNSNK  180
TDKASMLDEA IDYLKQLQLQ VQMLTMRNGF SQYPMCQPGV LEPAQLSQMK MGFYEGNELL  240
HMNEAGMLPE NQDAPTNSLV NISNQSANSA QPSVAAFSSI INSETSFGMD SSIQGHLRPF  300
QLHTSSEENC REDIIHHQQE NVDHSDTKFL GQELLKEFQA GAKGTVSIHY DTQASEAKTE  360
PWKHAP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.12e-52bHLH family protein